BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016B12SP1|AL426969
(886 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig351 1277 0.0
3x_Contig1291 185 2e-46
>3x_Contig351
Length = 1152
Score = 1277 bits (616), Expect = 0.0
Identities = 711/781 (91%), Gaps = 1/781 (0%)
Strand = Plus / Plus
Query: 105 ccacgcaatgggtggtcgtgaaggtttaatcgataccgccgtgaaaacagctgaaacagg 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccacgcaatgggtggtcgtgaaggtttaatcgataccgccgtgaaaacagctgaaacagg 60
Query: 165 ttatattcaacgtcgtttggtcaaagctttggaggatatcatggtccattatgatggtac 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttatattcaacgtcgtttggtcaaagctttggaggatatcatggtccattatgatggtac 120
Query: 225 aacaagawactctctagggaatgttatacagttcatctatggtgaagatggtatggatgc 284
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aacaagaaactctctagggaatgttatacagttcatctatggtgaagatggtatggatgc 180
Query: 285 agcgcacatcgaaaagcagtcaattgatactattcctggwtctgatagtgctttcgaaag 344
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 181 agcgcacatcgaaaagcagtcaattgatactattcctggatctgatagtgctttcgaaag 240
Query: 345 gcgttacagaatcgacctattaaatgaggagtacgccttggwtccctctcttttggaatc 404
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 241 gcgttacagaatcgacctattaaatgaggagtacgccttggatccctctcttttggaatc 300
Query: 405 aggatccgaaattatcggagactcaaaattgcaattactacttaacgatgagtacaaaca 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggatccgaaattatcggagactcaaaattgcaattactacttaacgatgagtacaaaca 360
Query: 465 gcttgttgatgaccgtcaaattttkagaagggtgtttgtcgatgktkaacacaattkkcc 524
|||||||||||||||||||||||| ||||||||||||||||||| | ||||||||| ||
Sbjct: 361 gcttgttgatgaccgtcaaattttgagaagggtgtttgtcgatggtgaacacaattggcc 420
Query: 525 tctacctkttaacatcaakcktattatccakaactcacaknaaacattccktatnkttna 584
||||||| |||||||||| | ||||||||| |||||||| ||||||||| ||| | |
Sbjct: 421 tctacctgttaacatcaagcgtattatccagaactcacagcaaacattccgtatcgatca 480
Query: 585 aaccaaaccaactkatttwwcaattkadkatkttatttcakkcgtaakktaattacagka 644
||||||||||||| |||| ||||| | || |||||||| ||||| |||||||| |
Sbjct: 481 aaccaaaccaactgatttaacaattgaagatgttatttcaggcgtaaggaaattacagga 540
Query: 645 kaakcttctaktcktacktkkkaagagtgacatcttawwakawtctcaacaaaatkcaat 704
|| |||||| || ||| | ||||||||||||||| | | ||||||||||| ||||
Sbjct: 541 gaagcttctagtcgtacgtgggaagagtgacatcttaaaagaagctcaacaaaatgcaat 600
Query: 705 cackttattcttctkcttattkckttctcktctakctacacktakkktkatttawtaata 764
||| ||||||| || |||||| | ||||| |||| |||||| || | ||| | ||||
Sbjct: 601 cacgttattctgctgcttattgcgttctcgtctagctacacgtagggtgattgaagaata 660
Query: 765 cakatttawcakacagaccttttattgkgttgctaaacaatatcgaakcacaattcctaa 824
|| ||| | || |||||||||| |||| | ||||||||||||||||| ||||||||||||
Sbjct: 661 cagattgaacagacagacctttgattggg-tgctaaacaatatcgaagcacaattcctaa 719
Query: 825 katctattgttcatccaggtgaaatggttggtgttttggctgctcaatccatcggtgagc 884
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gatctattgttcatccaggtgaaatggttggtgttttggctgctcaatccatcggtgagc 779
Query: 885 c 885
|
Sbjct: 780 c 780
>3x_Contig1291
Length = 6514
Score = 185 bits (89), Expect = 2e-46
Identities = 92/93 (98%)
Strand = Plus / Minus
Query: 1 gatcgtactcttccacatttctccaaagacgattattctcctgaatccaagggtttcgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 gatcgtactcttccacatttctccaaagacgattattctcctgaatccaagggtttcgtg 52
Query: 61 gaaaattcatatttgagaggtctaacaccccaa 93
| |||||||||||||||||||||||||||||||
Sbjct: 51 gtaaattcatatttgagaggtctaacaccccaa 19
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.44 0.720 1.36
Gapped
Lambda K H
1.44 0.720 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3732
Number of Sequences: 1807
Number of extensions: 3732
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 2
length of query: 886
length of database: 10,358,551
effective HSP length: 16
effective length of query: 870
effective length of database: 10,329,639
effective search space: 8986785930
effective search space used: 8986785930
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.0 bits)
S1: 11 (23.3 bits)
S2: 48 (100.0 bits)